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02 · Understand · Research dashboard

From a national dataset to one animal’s story.

The NEON Small Mammal Tracker makes roughly 178,000 public box-trapping capture records explorable—from a map of field sites to the recapture history of an individual ear-tagged animal.

Explore the live app View the code
46 NEON field sites
~178k Capture records mapped
145 Species represented

The problem

Open data is not automatically approachable data.

NEON’s public small-mammal product is rich enough to support ecological questions at multiple scales. The raw records are also too detailed for a visitor who simply wants to know what lives at a site, how often an animal returned, or how captures changed over time.

The challenge was to preserve the scientific caveats while giving each kind of visitor a clear first move.

National map of NEON small-mammal field sites sized by captures
The opening map makes place the first navigation decision.

The solution

Layer the questions from simple to specific.

Visitors can begin with a site or a species, then move into composition, individual leaderboards, body-size patterns, trap-grid home ranges, diversity, and detection-corrected abundance.

Plain-language summaries sit beside the charts. Method notes identify reused ear tags, genus-only records, lower-bound richness estimates, confidence intervals, and the distinction between observed animals and model-based population estimates.

Small Mammal Tracker species-composition view for a selected field site
Species composition turns the selected site into a readable community profile.

Defensible proof

The method is visible alongside the result.

The app is live, works on mobile, and is built from public NEON small-mammal box-trapping data (DP1.10072.001). Visitors can inspect the same site through several views and compare raw observed counts with detection-corrected estimates rather than treating them as interchangeable.

Small Mammal Tracker individual animal leaderboard with rarity tiers
Individual capture histories make repeat observations tangible.
Small Mammal Tracker trap-grid home-range view
Capture locations replay on the trap grid for one animal at a time.
Detection-corrected abundance estimate with confidence interval and minimum number known alive
Detection-corrected abundance stays distinct from minimum number known alive.
Technical details

The application is built in R Shiny. Each site’s records are pre-bundled into compressed R data files so common interactions do not need a network round trip. A scheduled GitHub Action rebuilds the data bundle from the public source.

Closed-capture estimates use Schnabel or Chapman approaches where appropriate. The interface presents uncertainty and known data limitations rather than collapsing them into a single authoritative-looking number.

Have a dataset people avoid opening?

Give each audience a clear way into it.

We can shape a research or operations dashboard around the questions people actually ask while keeping the method available for those who need it.

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